overcooked-ebiomedpku
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circFL-seq

  • About circFL-seq & circfull
  • circFL-seq Library Construction
  • circfull
    • Installation
    • Usage
    • Output files

ucircFL-seq

  • About ucircFL-seq & ucircfull
  • ucircFL-seq Library Construction
  • ucircfull
    • Installation
    • UMI extraction
    • UMI clustering
    • circRNA identification

DEBKS

  • About DEBKS
  • Installation
  • Usage
  • Example workflow
  • Import from CIRIquant

SERVE

  • About SERVE
  • Installation
  • Usage
  • Example pipeline

TEIRI

  • About TEIRI
  • Installation
  • Usage
  • Example

Deep-TEIRI

  • About Deep-TEIRI
  • Installation
  • Usage
  • Example

TERA

  • About TERA
  • Installation
  • Usage
  • Example

MTM

  • MTM

MTGT

  • MTGT

On this page

  • About
  • Guides
  • License
  1. overcooked-ebiomedpku /
  2. About TERA

About TERA¶

TERA

About¶

TERA is a pipeline for Transposable element-derived RNA analysis.

The upstream repository includes:

  • TERA scripts: https://github.com/janky-yz/TERA/tree/main/script

  • TERA reference files (hg19, hg38, chm13v2.0): https://github.com/janky-yz/TERA

Guides¶

  • Installation

  • Usage

  • Example

License¶

Copyright (C) 2022 Jianqi She (janky666@bjmu.edu.cn).

See upstream license details: https://github.com/janky-yz/TERA/blob/main/LICENSE

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