About SERVE

About

SERVE is a pipeline for identifying expressed endogenous retroviruses (ERVs).

This repository contains the SERVE pipeline scripts and ERV annotation files:

• Pipeline scripts: https://github.com/janky-yz/SERVE/tree/main/script

• Annotation files: https://github.com/janky-yz/SERVE/tree/main/Annotation

Guides

• Installation

• Usage

• Example pipeline

License

Copyright (C) 2021 Jianqi She (janky@pku.edu.cn).

See LICENSE in the upstream repository for license rights and limitations: https://github.com/janky-yz/SERVE/blob/main/LICENSE

Citation

If you use SERVE in your research, please cite:

• Jianqi She, Minghao Du, Zhanzhan Xu, Yueqi Jin, Yu Li, Daoning Zhang, Changyu Tao, Jian Chen, Jiadong Wang, Ence Yang, The landscape of hervRNAs transcribed from human endogenous retroviruses across human body sites, Genome Biology, 2022, 23:231, https://doi.org/10.1186/s13059-022-02804-w